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Online servers regarding ß-barrel topology prediction:
DeepTMHMM: A deep learning Model for transmembrane topology prediction and classification
TMbed: Transmembrane proteins predicted through language model embeddings
MASSP: A multitask deep-learning method for predicting membrane associations and secondary structures of proteins
PRED-TMBB2: Improved topology prediction and detection of beta-barrel outer membrane proteins
BetAware-Deep: An accurate web server for discrimination and topology prediction of prokaryotic transmembrane β-barrel proteins
BOCTOPUS2:Inclusion of dyad-repeat pattern improves topology prediction of transmembrane β-barrel proteins
HHomp--prediction and classification of outer membrane proteins
ConBBPRED: consensus Prediction of transmembrane beta-barrel proteins
transFold: super-secondary structure prediction of transmembrane ß-barrel proteins
TMBpro: Transmembrane beta-barrel secondary structure, beta contact and tertiary structure prediction
HMM-B2TMR: a sequence-profile-based HMM for predicting and discriminating beta barrel membrane proteins
B2TMR: prediction of the transmembrane regions of beta-barrel membrane proteins with a neural network-based predictor
BetAware: Feed-Forward Neural Network based recognizer for outer-membrane beta-barrel proteins
PROFtmb: a prediction service for bacterial transmembrane beta-barrels
BOMP: The ß-barrel outer membrane protein predictor
Online databases that include ß-barrel outer membrane proteins:
RCSB: Protein Data Bank
Pfam: Protein Families database
TCDB: Transport Classification Database
TMBB-DB: Transmembrane ß-Barrel Database
TOPDB: Topology Database of Transmembrane Proteins
Database of membrane proteins of known 3D structure (Stephen White lab)
PSORTdb: A database of protein subcellular localizations for bacteria
PDBTM: Protein Data Bank of Transmembrane Proteins
Orientations of Proteins in Membranes (OPM) database
Membrane Protein Data Bank