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The Lipid A 3-O-deacylase (PagL) Family [Function: Enzyme] Seed alignment | Full alignment | Pfam page | Pfam Wiki page | ||||
Members of this family are enzymes catalyzing the removal of the fatty acyl chain from the 3rd position of lipid A, the highly conserved lipid moiety of the lipopolysaccharide (LPS), which is one of the main constituents of the Gram-negative bacterial outer membrane. The first identified member of the family was the outer membrane-localized lipid A 3-O-deacylase, which is encoded by the PagL gene of Salmonella enterica serovar typhimurium. Homologs have been discovered in a variety of Gram-negative bacteria, although the overall sequence similarity is rather low. When expressed in Escherichia coli and upon deacylation by PagL, lipid A underwent another modification, which was the result of the activity of the endogenous palmitoyl-transferase PagP. A conserved histidine-serine couple was identified as the active site suggesting a catalytic mechanism similar to serine hydrolases. The exact biological function of PagL remains unclear, while its high-resolution structure revealed a dimeric structure with ß-barrels comprising 8 transmembrane strands. | ||||
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Literature references | ||||
Polymyxin-Induced Lipid A Deacylation in Pseudomonas aeruginosa Perturbs Polymyxin Penetration and Confers High-Level Resistance ACS Chem Biol. 2018 Jan 19;13(1):121-130. doi: 10.1021/acschembio.7b00836. Epub 2017 Dec 11. PMID: 29182311 | ||||
The LpxL acyltransferase is required for normal growth and penta-acylation of lipid A in Burkholderia cenocepacia Mol Microbiol. 2017 Apr;104(1):144-162. doi: 10.1111/mmi.13618. Epub 2017 Jan 27. PMID: 28085228 | ||||
Meningococcal Outer Membrane Vesicle Composition-Dependent Activation of the Innate Immune Response Infect Immun. 2016 Sep 19;84(10):3024-33. doi: 10.1128/IAI.00635-16. Print 2016 Oct. PMID: 27481244 | ||||
LPS Remodeling Triggers Formation of Outer Membrane Vesicles in Salmonella mBio. 2016 Jul 12;7(4):e00940-16. doi: 10.1128/mBio.00940-16. PMID: 27406567 | ||||
Immunological evaluation of OMV(PagL)+Bap(1-487aa) and AbOmpA(8-346aa)+Bap(1-487aa) as vaccine candidates against Acinetobacter baumannii sepsis infection Mol Immunol. 2015 Oct;67(2 Pt B):552-8. doi: 10.1016/j.molimm.2015.07.031. Epub 2015 Aug 12. PMID: 26277277 | ||||
Heterologous expression of 3-O-deacylase in Acinetobacter baumannii modulates the endotoxicity of lipopolysaccharide J Mol Microbiol Biotechnol. 2015;25(1):37-44. doi: 10.1159/000371815. Epub 2015 Feb 13. PMID: 25677974 | ||||
Acellular pertussis vaccine based on outer membrane vesicles capable of conferring both long-lasting immunity and protection against different strain genotypes Vaccine. 2014 Feb 12;32(8):931-7. doi: 10.1016/j.vaccine.2013.12.048. Epub 2014 Jan 4. PMID: 24397896 | ||||
Elucidation of the 3-O-deacylase gene, pagL, required for the removal of primary ß-hydroxy fatty acid from the lipid A in the nitrogen-fixing endosymbiont Rhizobium etli CE3 J Biol Chem. 2013 Apr 26;288(17):12004-13. doi: 10.1074/jbc.M113.470484. Epub 2013 Mar 19. PMID: 23511636 | ||||
Palmitoylation state impacts induction of innate and acquired immunity by the Salmonella enterica serovar typhimurium msbB mutant Infect Immun. 2011 Dec;79(12):5027-38. doi: 10.1128/IAI.05524-11. Epub 2011 Sep 19. PMID: 21930761 | ||||
Outer membrane vesicles obtained from Bordetella pertussis Tohama expressing the lipid A deacylase PagL as a novel acellular vaccine candidate Vaccine. 2011 Feb 11;29(8):1649-56. doi: 10.1016/j.vaccine.2010.12.068. Epub 2011 Jan 4. PMID: 21211579 | ||||
Extracellular loops of lipid A 3-O-deacylase PagL are involved in recognition of aminoarabinose-based membrane modifications in Salmonella enterica serovar typhimurium J Bacteriol. 2008 Aug;190(16):5597-606. doi: 10.1128/JB.00587-08. Epub 2008 Jun 20. PMID: 18567660 | ||||
Structural biology of membrane-intrinsic beta-barrel enzymes: sentinels of the bacterial outer membrane Biochim Biophys Acta. 2008 Sep;1778(9):1881-96. doi: 10.1016/j.bbamem.2007.07.021. Epub 2007 Aug 11. PMID: 17880914 | ||||
Crystal structure and catalytic mechanism of the LPS 3-O-deacylase PagL from Pseudomonas aeruginosa Proc Natl Acad Sci U S A. 2006 May 2;103(18):7071-6. doi: 10.1073/pnas.0509392103. Epub 2006 Apr 21. PMID: 16632613 | ||||
Dissemination of lipid A deacylases (pagL) among gram-negative bacteria: identification of active-site histidine and serine residues J Biol Chem. 2005 Mar 4;280(9):8248-59. doi: 10.1074/jbc.M414235200. Epub 2004 Dec 20. PMID: 15611102 | ||||
A PhoP/PhoQ-induced Lipase (PagL) that catalyzes 3-O-deacylation of lipid A precursors in membranes of Salmonella typhimurium J Biol Chem. 2001 Mar 23;276(12):9083-92. doi: 10.1074/jbc.M010730200. Epub 2000 Dec 6. PMID: 11108722 | ||||
Proteins in this family with 3D-structure |
View Entry | Description | Organism | Length | # strands |