OMPdb - Protein entry

::OMPdbID 1164369::	FASTA TEXT XML
Protein information
OMPdb Family	The General Bacterial Porin (GBP-1) Family 1
Protein description	Membrane protein
Gene name	Name=ompC, ORFNames=A9P13_08750, AM446_09755, APT94_02950, BIU72_23795, BK375_19225, BON83_14340, BON87_08565, BON96_18490, C5N07_04550, CIG45_06430, CRX46_09045, D9D31_10490, D9D43_01315, D9E34_08140, D9G48_09185, D9I88_24090, D9J78_13270, DD762_02040, DM102_10555, DU309_03055, E5S58_04110, EA214_03335, EI028_02960, EJC75_10160, ELV15_05295, ELV28_16505, ELX76_00625, ELY41_07690, ELY48_03845, EQ820_01100, EQ823_06480, EST51_08950, EYD11_07815, EYY34_05065, FAF34_013700, FKO60_02770, FNJ69_09635
Species	Escherichia coli
NCBI taxonomy	562
Protein sequence	MKVKVLSLLVPALLVAGAANAAEIYNKDGNKLDLYGKVDGLHYFSDNDSKDGDKTYMRLG FKGETQVTDQLTGYGQWEYQIQGNEPESDNSSWTRVAFAGLKFQDVGSFDYGRNYGVVYD VTSWTDVLPEFGGDTYDSDNFMQQRGNGFATYRNTDFFGLVDGLDFAVQYQGKNGSAHGE GMTTNGRDDVFEQNGDGVGGSITYNYEGFGIGAAVSSSKRTWDQNNTGLIGTGDRAETYT GGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKG KNLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNRFTRDAGINTDDIVALGL VYQF
Sequence length	364 AA
Fragment	No
pHHM coverage	100.00 %
Cross-references
Uniprot	Q9K597
PDB	2XE2 \| 2XE3 \| 2XE5 \| 2XG6
Pfam	PF00267
EMBL	EU372012 \| GQ166997 \| GQ166998 \| GQ166999 \| GQ167003 \| CP020516 \| CP032261 \| AJ295721 \| BFOO01000150 \| RDUM01000002 \| JYEF01000110 \| LNHR01000079 \| RNLZ01000002 \| RNTA01000018 \| RNRL01000011 \| RODN01000009 \| RNZZ01000024 \| ROBG01000105 \| RYBG01000002 \| WSVA01000002 \| WSVS01000002 \| MOKA01000046 \| NPHR01000004 \| MVPO01000057 \| PUJR01000003 \| QEMT01000002 \| CP034404 \| CP036177 \| CP041563 \| CP040263 \| RRVS01000001 \| SCGD01000004 \| SCGC01000001 \| QKMW01000006 \| UDGK01000021 \| UGBX01000001 \| MTXQ01000031 \| MTXU01000051 \| MTYD01000045 \| RZGI01000003 \| RZGE01000020 \| RZEL01000001 \| RZCW01000010 \| SRNB01000002 \| RZDS01000023 \| NXEQ01000012 \| SZTZ01000066 \| SWMO02000337 \| VHKY01000001
InterPro	IPR033900 \| IPR023614 \| IPR001897 \| IPR001702 \| IPR013793
PROSITE	PS00576
PRINTS	PR00183 \| PR00182
Signal peptide annotation
Amino acids	1-21
Sequence	MKVKVLSLLVPALLVAGAANA
Annotation source	Experimentally verified
TM annotation
# beta strands	16
Protein topology	IIIIIIIIIIIIIIIIIIIIIMMMMMMMMMMOOOOOOOOOOOOOOOOOOOOOOOOOOMMM MMMIIIIIIIIIMMMMMMMMMMMMMOMMMMMMMMMMMMMMMMMIIMMMMMMMMMMOOOOO OOOOOOOOOOOOOOOOOOOOOOOOMMMMMMMMMMMIIIIMMMMMMMOOOOOOOOOOOOOO OOOOOOOOOOOOOOOOOOMMMMMMMIIIMMMMMOOOOOOOOOOOOOOOOOOOOOOOOOOM MMMMMMIIIMMMMMMMMOOOOOOOOOOOOOOOOOOOOOMMMMMMMIIIMMMMMMMMOOOO OOOOOOOOOOOOOOOMMMMMMMIIIIIMMMMMMMMOOOOOOOOOOOOOOOOOOOOMMMMM MMMI
Annotation reliability	100.00
Annotation source	Homology to 3D-structure