|
::OMPdbID 1163507:: | |
Protein information |
| OMPdb Family | The Imp/OstA Family |
| Protein description | LPS-assembly protein LptD |
| Gene name | Name=lptD, Synonyms=impostA, Name=lptD, Synonyms=impostA |
| Species | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) |
| NCBI taxonomy | 99287 |
| Protein sequence |
MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAK
GNYPDDAVFTGNVDIMQGNSRLQADEVQLHQKQAEGQPEPVRTVDALGNVHYDDNQVILK
GPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILENGSFTSCLPGSDTW
SVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY
FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGEGVMELDYLPSDKVYED
DHPKEGDKHRWLFYWQHSGVMDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFS
VGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYHNDLGPFDTRIYGQAVHFVNT
KDNMPEATRVHLEPTINLPLSNRWGSLNTEAKLMATHYQQTNLDSYNSDPNNKNKLEDSV
NRVMPQFKVDGKLIFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYN
GLFRDRTYGGLDRIASANQVTTGVTTRIYDDAAVERFNVSVGQIYYFTESRTGDDNIKWE
NDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATSSSSLEYRRDQDRLVQLNYRY
ASPEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLG
LQYNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNIL
PYQSSM
|
| Sequence length | 786 AA |
| Fragment | No |
| pHHM coverage | 99.74 % |
| Cross-references |
| Uniprot | Q8ZRW0 |
| PDB | 4N4R |
|
| Pfam | PF04453 | PF03968 |
| EMBL | AE006468 |
| InterPro | IPR020889 | IPR007543 | IPR005653 |
| Signal peptide annotation |
| Amino acids | 1-24 |
| Sequence |
MKKRIPTLLATMIASALYSHQGLA
|
| Annotation source | Experimentally verified |
| TM annotation |
| # beta strands | 26 |
| Protein topology |
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIMMMMMMMMOOOO
OMMMMMMMMMIIIIIIMMMMMMMMOOOOOOMMMMMMMMIIIMMMMMMMMMOOOOOOOOOO
OOOOOOOOOOOOMMMMMMMIIIIIMMMMMMMMOOOOOOOOOOOOOOOOOOOOOOOMMMMM
MMMMIIIMMMMMMMMOOOOOOOOOOOOOOOOMMMMMMMMIIIIIIIMMMMMMMMOOOOOO
OOOOOOOOOOMMMMMMMMIIIIIIIIMMMMMMMMMOOOOOOOOOOOOOOOOOOOOOOOOO
OOOOMMMMMMMMIIIIIIIIIIIIIIIIIIIMMMMMMMMOOOOOOOOOOOOOOOOOOOOO
OOOOOOOOOOOOOOOOOOMMMMMMMIIIIIIIIIIIIIMMMMMMMOOOOOOOOOOOOOOO
OOOOOOOOMMMMMMMIIIIIIIIMMMMMMMOOOOOOOOMMMMMMMIIIIIIIIMMMMMMM
OOOOOOOOOOOOOOOOOOOOOOOOOMMMMMMMIIIIIIIIMMMMMMMOOOOOOOOMMMMM
MMIIIIIIIMMMMMMMOOOOOOOOOOOOOOOMMMMMMMMIIIIIIIIIIIIIIIIIIIII
IIIIII
|
| Annotation reliability | 100.00 |
| Annotation source | Homology to 3D-structure |
