|
::OMPdbID 1157075:: | |
Protein information |
| OMPdb Family | The Two-Partner Secretion (TPS) Family |
| Protein description | Outer membrane transporter CdiB |
| Gene name | Name=cdiB |
| Species | Escherichia coli |
| NCBI taxonomy | 562 |
| Protein sequence |
MRHRQDNLLANRTLLPGMASGQYVFRLCTFSPVVRYFSLLPCLCILSFSSPAAMLSPGDR
SAIQQQQQQLLDENQRQRDALERSAPLTITPSPETSAGTEGPCFTVSSIVVSGATRLTSA
ETDRLVAPWVNQCLNITGLTAVTDAMTDSYIRRGYITSRAFLTEQDLSGGVLHITVMEGR
LQQIRAEGADLPARTLKMVFPGMEGKVLNLRDIEQGMEQINRLRTEPVQIEISPGDREGW
SVVTLTALPEWPVTGSVGIDNSGQKSTGTGQLNGVLSFNNPLGLADNWFVSGGRSSDFSV
SHDARNFAAGVSLPYGYTLVDYTYSWSDYLSTIDNRGWRWRSTGDLQTHRLGLSHVLFRN
GDMKTALTGGLQHRIIHNYLDDVLLQGSSRKLTSFSVGLNHTHKFLGGVGTLNPVFTRGM
PWFGAESDHGKRGDLPVNQFRKWSVSASFQRPVTDRVWWLTSAYAQWSPDRLHGVEQLSL
GGESSVRGFKDQYISGNNGGYLRNELSWSLFSLPYVGTVRAVAALDGGWLHSDSDDPYSS
GTLWGAAAGLSTTSGHVSGSFTAGLPLVYPDWLAPDHLTVYWRVAVAF
|
| Sequence length | 588 AA |
| Fragment | No |
| pHHM coverage | 99.68 % |
| Cross-references |
| Uniprot | Q3YL97 |
|
| Pfam | PF08479 | PF17287 | PF03865 |
| EMBL | DQ100454 |
| InterPro | IPR005565 | IPR013686 | IPR034746 | IPR035251 | IPR027282 |
| PROSITE | PS51779 |
| Signal peptide annotation |
| No information available |
| TM annotation |
| # beta strands | 16 |
| Protein topology |
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIMMMMMMMMOOOOOOOMMMMMMMMIIIIIIIIIIMMMMMMMMOOOOO
OOOOMMMMMMMMIIIIIIIMMMMMMMMOOOOOOOOOOOOOOOOOOOMMMMMMMMIIIIII
IIIIIIMMMMMMMMOOOOOOOOOOOOOOOOOOMMMMMMMMIIIIIIIIIIMMMMMMMMMM
MOOOOOOOOOOOOOOOOOOOMMMMMMMMMIIIIIIIIIMMMMMMMMMOOOOOOOOOOOOO
OOOOOOOOOOOOOOOOOOOOOOOOOOMMMMMMMIIIIIIMMMMMMMMMOOOOOOOOOOOO
OOOMMMMMMMMIIIIMMMMMMMMMOOOOOOOOOOOOOOMMMMMMMMMI
|
| Annotation reliability | 100.00 |
| Annotation source | Homology to 3D-structure |
