|
::OMPdbID 1151386:: | |
Protein information |
| OMPdb Family | The Outer Membrane Receptor (OMR-TonB Dependent Receptor) Family |
| Protein description | Outer membrane protein assembly factor BamA |
| Gene name | Name=bamA |
| Species | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM14847 / LMG 12228 / 1C / PRS 101 / PAO1) |
| NCBI taxonomy | 208964 |
| Protein sequence |
MPAPHGLSPLSKAFLMRRAFQRRILPHSLAMALSLPLAGYVQAQEVEFDIPPQALGSALQ
EFGRQADIQVLYRPEEVRNKRSSAIKGKLEPNQAITELLRGTGASVDFQGNAITISVAEA
ADSSVDLGATMITSNQLGTITEDSGSYTPGTIATATRLVLTPRETPQSITVVTRQNMDDF
GLNNIDDVMRHTPGITVSAYDTDRNNYYARGFSINNFQYDGIPSTARNVGYSAGNTLSDM
AIYDRVEVLKGATGLLTGAGSLGATINLIRKKPTHEFKGHVELGAGSWDNYRSELDVSGP
LTESGNVRGRAVAAYQDKHSFMDHYERKTSVYYGILEFDLNPDTMLTVGADYQDNDPKGS
GWSGSFPLFDSQGNRNDVSRSFNNGAKWSSWEQYTRTVFANLEHNFANGWVGKVQLDHKI
NGYHAPLGAIMGDWPAPDNSAKIVAQKYTGETKSNSLDIYLTGPFQFLGREHELVVGTSA
SFSHWEGKSYWNLRNYDNTTDDFINWDGDIGKPDWGTPSQYIDDKTRQLGSYMTARFNVT
DDLNLFLGGRVVDYRVTGLNPTIRESGRFIPYVGAVYDLNDTYSVYASYTDIFMPQDSWY
RDSSNKLLEPDEGQNYEIGIKGEYLDGRLNTSLAYFEIHEENRAEEDALYNSKPTNPAIT
YAYKGIKAKTKGYEAEISGELAPGWQVQAGYTHKIIRDDSGKKVSTWEPQDQLSLYTSYK
FKGALDKLTVGGGARWQGKSWQMVYNNPRSRWEKFSQEDYWLVDLMARYQITDKLSASVN
VNNVFDKTYYTNIGFYTSASYGDPRNLMFSTRWDF
|
| Sequence length | 815 AA |
| Fragment | No |
| pHHM coverage | 90.02 % |
| Cross-references |
| Uniprot | P48632 |
| PDB | 1XKH | 2IAH | 2O5P | 2W16 | 2W6T | 2W6U | 2W75 | 2W76 | 2W77 | 2W78 | 5ODW |
|
| Pfam | PF07715 | PF07660 | PF00593 |
| EMBL | L10210 | U07359 | AE004091 |
| InterPro | IPR012910 | IPR037066 | IPR011662 | IPR039423 | IPR000531 | IPR036942 | IPR010917 | IPR010105 |
| SMART | SM00965 |
| PROSITE | PS01156 |
| PIR | A40601 | H83345 |
| Signal peptide annotation |
| Amino acids | 1-43 |
| Sequence |
MPAPHGLSPLSKAFLMRRAFQRRILPHSLAMALSLPLAGYVQA
|
| Annotation source | Experimentally verified |
| TM annotation |
| # beta strands | 22 |
| Protein topology |
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIMMMMMMMMOOOOOOO
OOOOMMMMMMMMIIIIIIIIMMMMMMMMOOOOOOOOOOOOOMMMMMIIIIIIIMMMMMMM
MOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOMMMMMMMIIIIIIIIMMMMMMMOO
OOOOOOOOOOOOOOOOOOOOOOOOOOMMMMMMMIIIIIIIIIIIIIIIIIIIMMMMMMMM
MMOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOMMMMMMMMIII
IIMMMMMMMMMOOOOOOOOOOOOOOOOOOMMMMMMMMIIIIIMMMMMMMMOOOOOOOOOO
OOOOOOOOOOOOOOOMMMMMMMIIIIIIMMMMMMMMOOOOOOOOOOOOOOOOOOOOOOOO
OOOOOOOOOOOOMMMMMMMIIIIIMMMMMMMMOOOOOOOOOOOOOOOOOOOOMMMMMMMI
IIIIIIIMMMMMMMMOOOOOOOOOOOOOOOOOOOOOOOOOOOMMMMMMMIIIIIMMMMMM
MMOOOOOOOOOOOOOOOOOOOOOOOOMMMMMMMMM
|
| Annotation reliability | 100.00 |
| Annotation source | Homology to 3D-structure |
