|
::OMPdbID 1151342:: | |
Protein information |
| OMPdb Family | The Intimin/Invasin Family |
| Protein description | Nucleoside-specific channel-forming protein Tsx |
| Gene name | Name=tsx |
| Species | Escherichia coli O157:H7 |
| NCBI taxonomy | 83334 |
| Protein sequence |
MITHGCYTRTRHKHKLKKTLIMLSAGLGLFFYVNQNSFANGENYFKLGSDSKLLTHDSYQ
NRLFYTLKTGETVADLSKSQDINLSTIWSLNKHLYSSESEMMKAAPGQQIILPLKKLPFE
YSALPLLGSAPLVAAGGVAGHTNKLTKMSPDVTKSNMTDDKALNYAAQQAASLGSQLQSR
SLNGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKM
LAFGQVGARYIDSRFTANLGAGQRFFLPANMLGYNVFIDQDFSGDNTRLGIGGEYWRDYF
KSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLIYEQYYGDNVAL
FNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQFRYQFDKSWSQQIE
PQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNIPHDINGTEHSTQKIQLIVKSKY
GLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAYVQGGSNIYKVTARAYDRNGNSSN
NVQLTITVLSNGQVVDQVGVTDFTADKTSAKADNADTITYTATVKKNGVAQANVPVSFNI
VSGTATLGANSAKTDANGKATVTLKSSTPGQVVVSAKTAEMTSALNASAVIFFDQTKASI
TEIKADKTTAVANGKDAIKYTVKVMKNGQPVNNQSVTFSTNFGMFNGKSQTQATTGNDGR
ATITLTSSSAGKATVSATVSDGAEVKATEVTFFDELKIDNKVDIIGNNVRGELPNIWLQY
GQFKLKASGGDGTYSWYSENTSIATVDASGKVTLNGKGSVVIKATSGDKQTVSYTIKAPS
YMIKVDKQAYYADAMSICKNLLPSTQTVLSDIYDSWGAANKYSHYSSMNSITAWIKQTSS
EQRSGVSSTYNLITQNPLPGVNVNTPNVYAVCVE
|
| Sequence length | 934 AA |
| Fragment | No |
| pHHM coverage | 99.28 % |
| Cross-references |
| Uniprot | P43261 |
| PDB | 2ZQK | 2ZWK | 3NCW | 3NCX | 4E1S | 5G26 |
|
| Pfam | PF02369 | PF02368 | PF11924 | PF07979 | PF01476 |
| EMBL | Z11541 | X60439 | AF071034 | AF081182 | AF081183 | AE005174 | BA000007 | U32312 | L08095 |
| InterPro | IPR003344 | IPR003343 | IPR016186 | IPR016187 | IPR024519 | IPR038177 | IPR013783 | IPR003535 | IPR013117 | IPR008964 | IPR018392 |
| SMART | SM00634 | SM00635 | SM00257 |
| PROSITE | PS51127 | PS51782 |
| PRINTS | PR01369 |
| PIR | C86045 | G91198 | I41193 |
| Signal peptide annotation |
| Amino acids | 1-38 |
| Sequence |
MITHGCYTRTRHKHKLKKTLIMLSAGLGLFFYVNQNSF
|
| Annotation source | Predicted [SignalP 5.0] |
| TM annotation |
| # beta strands | 12 |
| Protein topology |
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIMMMMMMMOOOOOOMMMMMMMMIIIIIIII
IMMMMMMMMOOOOOOOMMMMMMMMIIIIIIIMMMMMMMOOOOOOOOOOOMMMMMMMIIIM
MMMMMMOOOOOOOOOOOOOOOOOOOOOOOOMMMMMMMIIIIIIMMMMMMMOOOOOOOOOO
OOOOOOOOOOOOOMMMMMMMIIIIMMMMMMMOOOOOOOOOOMMMMMMMMIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
|
| Annotation reliability | 100.00 |
| Annotation source | Homology to 3D-structure |
