Browse Text search Protein search Domain search Download User manual Related links Citation & Contact


::OMPdbID 1151121::      
Protein information
OMPdb FamilyThe Outer Membrane Receptor (OMR-TonB Dependent Receptor) Family
Protein descriptionVitamin B12 transporter BtuB
Gene nameName=ompA
SpeciesEscherichia coli (strain K12)
NCBI taxonomy83333
Protein sequence

MIKKASLLTACSVTAFSAWAQDTSPDTLVVTANRFEQPRSTVLAPTTVVTRQDIDRWQST
SVNDVLRRLPGVDITQNGGSGQLSSIFIRGTNASHVLVLIDGVRLNLAGVSGSADLSQFP
IALVQRVEYIRGPRSAVYGSDAIGGVVNIITTRDEPGTEISAGWGSNSYQNYDVSTQQQL
GDKTRVTLLGDYAHTHGYDVVAYGNTGTQAQTDNDGFLSKTLYGALEHNFTDAWSGFVRG
YGYDNRTNYDAYYSPGSPLLDTRKLYSQSWDAGLRYNGELIKSQLITSYSHSKDYNYDPH
YGRYDSSATLDEMKQYTVQWANNVIVGHGSIGAGVDWQKQTTTPGTGYVEDGYDQRNTGI
YLTGLQQVGDFTFEGAARSDDNSQFGRHGTWQTSAGWEFIEGYRFIASYGTSYKAPNLGQ
LYGFYGNPNLDPEKSKQWEGAFEGLTAGVNWRISGYRNDVSDLIDYDDHTLKYYNEGKAR
IKGVEATANFDTGPLTHTVSYDYVDARNAITDTPLLRRAKQQVKYQLDWQLYDFDWGITY
QYLGTRYDKDYSSYPYQTVKMGGVSLWDLAVAYPVTSHLTVRGKIANLFDKDYETVYGYQ
TAGREYTLSGSYTF
Sequence length614 AA
FragmentNo
pHHM coverage96.09 %
Cross-references
UniprotP06129
PDB1NQE | 1NQF | 1NQG | 1NQH | 1UJW | 2GSK | 2GUF | 2YSU | 3M8B | 3M8D | 3RGM | 3RGN
PfamPF07715 | PF00593
EMBLM10112 | U00006 | U00096 | AP009048 | M57568 | L14556
InterProIPR010101 | IPR039426 | IPR012910 | IPR037066 | IPR000531 | IPR010916 | IPR036942 | IPR010917
PROSITEPS00430 | PS01156
PIRA65204
Signal peptide annotation
Amino acids1-20
Sequence

MIKKASLLTACSVTAFSAWA
Annotation sourceExperimentally verified
TM annotation
# beta strands22
Protein topology

IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIMMMMMMMMOOOOOOOOOOO
MMMMMMMMIIIIIIIIMMMMMMMMOOOOOOOOOOOOOMMMMMMMMMMMIIIIIIIIMMMM
MMMMOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOMMMMMMMIIIIIIIIMMMMM
MOOOOOOOOOOOOOOOOOOOOOOOOOOOMMMMMMMIIIIIIIIMMMMMMMMOOOOOOOOO
OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOMM
MMMMMMIIIIMMMMMMMMMOOOOOOOOOOOOMMMMMMIIIIIMMMMMMMMOOOOOOOOOO
OOOOOOOOOOOOOOOOOMMMMMMMIIIIMMMMMMMMOOOOOOOOOOOOOOOOOOOOOOOO
OOOMMMMMMMIIIIMMMMMMMMOOOOOOOOOOOOOOOOOOOOMMMMMMMIIIIMMMMMMM
MOOOOOOOOOOOOOOOOOOOOOOOOOMMMMMMMIIIIIMMMMMMMMOOOOOOOOOOOOOO
OOOOOMMMMMMMMM
Annotation reliability100.00
Annotation sourceHomology to 3D-structure


Elixir UTH dib compgen