|
::OMPdbID 1151121:: | |
Protein information |
| OMPdb Family | The Outer Membrane Receptor (OMR-TonB Dependent Receptor) Family |
| Protein description | Vitamin B12 transporter BtuB |
| Gene name | Name=ompA |
| Species | Escherichia coli (strain K12) |
| NCBI taxonomy | 83333 |
| Protein sequence |
MIKKASLLTACSVTAFSAWAQDTSPDTLVVTANRFEQPRSTVLAPTTVVTRQDIDRWQST
SVNDVLRRLPGVDITQNGGSGQLSSIFIRGTNASHVLVLIDGVRLNLAGVSGSADLSQFP
IALVQRVEYIRGPRSAVYGSDAIGGVVNIITTRDEPGTEISAGWGSNSYQNYDVSTQQQL
GDKTRVTLLGDYAHTHGYDVVAYGNTGTQAQTDNDGFLSKTLYGALEHNFTDAWSGFVRG
YGYDNRTNYDAYYSPGSPLLDTRKLYSQSWDAGLRYNGELIKSQLITSYSHSKDYNYDPH
YGRYDSSATLDEMKQYTVQWANNVIVGHGSIGAGVDWQKQTTTPGTGYVEDGYDQRNTGI
YLTGLQQVGDFTFEGAARSDDNSQFGRHGTWQTSAGWEFIEGYRFIASYGTSYKAPNLGQ
LYGFYGNPNLDPEKSKQWEGAFEGLTAGVNWRISGYRNDVSDLIDYDDHTLKYYNEGKAR
IKGVEATANFDTGPLTHTVSYDYVDARNAITDTPLLRRAKQQVKYQLDWQLYDFDWGITY
QYLGTRYDKDYSSYPYQTVKMGGVSLWDLAVAYPVTSHLTVRGKIANLFDKDYETVYGYQ
TAGREYTLSGSYTF
|
| Sequence length | 614 AA |
| Fragment | No |
| pHHM coverage | 96.09 % |
| Cross-references |
| Uniprot | P06129 |
| PDB | 1NQE | 1NQF | 1NQG | 1NQH | 1UJW | 2GSK | 2GUF | 2YSU | 3M8B | 3M8D | 3RGM | 3RGN |
|
| Pfam | PF07715 | PF00593 |
| EMBL | M10112 | U00006 | U00096 | AP009048 | M57568 | L14556 |
| InterPro | IPR010101 | IPR039426 | IPR012910 | IPR037066 | IPR000531 | IPR010916 | IPR036942 | IPR010917 |
| PROSITE | PS00430 | PS01156 |
| PIR | A65204 |
| Signal peptide annotation |
| Amino acids | 1-20 |
| Sequence |
MIKKASLLTACSVTAFSAWA
|
| Annotation source | Experimentally verified |
| TM annotation |
| # beta strands | 22 |
| Protein topology |
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIMMMMMMMMOOOOOOOOOOO
MMMMMMMMIIIIIIIIMMMMMMMMOOOOOOOOOOOOOMMMMMMMMMMMIIIIIIIIMMMM
MMMMOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOMMMMMMMIIIIIIIIMMMMM
MOOOOOOOOOOOOOOOOOOOOOOOOOOOMMMMMMMIIIIIIIIMMMMMMMMOOOOOOOOO
OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOMM
MMMMMMIIIIMMMMMMMMMOOOOOOOOOOOOMMMMMMIIIIIMMMMMMMMOOOOOOOOOO
OOOOOOOOOOOOOOOOOMMMMMMMIIIIMMMMMMMMOOOOOOOOOOOOOOOOOOOOOOOO
OOOMMMMMMMIIIIMMMMMMMMOOOOOOOOOOOOOOOOOOOOMMMMMMMIIIIMMMMMMM
MOOOOOOOOOOOOOOOOOOOOOOOOOMMMMMMMIIIIIMMMMMMMMOOOOOOOOOOOOOO
OOOOOMMMMMMMMM
|
| Annotation reliability | 100.00 |
| Annotation source | Homology to 3D-structure |
